VThunter
a database for single-cell screening of virus target cells in animal kingdom
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Alpaca

Scientific Name: Vicugna pacos

Taxonomy: Cellular organisms-> Eukaryota-> Opisthokonta-> Metazoa-> Eumetazoa-> Bilateria-> Deuterostomia-> Chordata-> Craniata-> Vertebrata-> Gnathostomata-> Teleostomi-> Euteleostomi-> Sarcopterygii-> Dipnotetrapodomorpha-> Tetrapoda-> Amniota-> Mammalia-> Theria-> Eutheria-> Boreoeutheria-> Laurasiatheria-> Artiodactyla-> Tylopoda-> Camelidae-> Vicugna

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Rabies lyssavirus

Family: Rhabdoviridae

Receptor: NCAM1

Receptor NCAM1 information

Summary: This gene encodes a cell adhesion protein which is a member of the immunoglobulin superfamily. The encoded protein is involved in cell-to-cell interactions as well as cell-matrix interactions during development and differentiation. The encoded protein plays a role in the development of the nervous system by regulating neurogenesis, neurite outgrowth, and cell migration. This protein is also involved in the expansion of T lymphocytes, B lymphocytes and natural killer (NK) cells which play an important role in immune surveillance. This protein plays a role in signal transduction by interacting with fibroblast growth factor receptors, N-cadherin and other components of the extracellular matrix and by triggering signalling cascades involving FYN-focal adhesion kinase (FAK), mitogen-activated protein kinase (MAPK), and phosphatidylinositol 3-kinase (PI3K). One prominent isoform of this gene, cell surface molecule CD56, plays a role in several myeloproliferative disorders such as acute myeloid leukemia and differential expression of this gene is associated with differential disease progression. For example, increased expression of CD56 is correlated with lower survival in acute myeloid leukemia patients whereas increased severity of COVID-19 is correlated with decreased abundance of CD56-expressing NK cells in peripheral blood. Alternative splicing results in multiple transcript variants encoding distinct protein isoforms. [provided by RefSeq, Aug 2020] [NCBI]  [Proteinatlas]

Data Source

Data set information

Project Date Technology Tissue Condition Cell PMID/DOI
Vthunter_0001 2021.04 10X Genomics Frontal Normal 3583 Link
Vthunter_0002 2021.04 10X Genomics Liver Normal 10408 Link
Vthunter_0003 2021.04 10X Genomics Lung Normal 1430 Link
Featureplot of receptors

Featureplot of receptors

mRNA expression of NCAM1 in human tissues   [NCBI]

Expression: Biased expression in brain (RPKM 90.3), adrenal (RPKM 31.4) and 6 other tissues

Protein expression of NCAM1 in human tissues   [Proteinatlas]